Publications

2021

  1. Virtual brain grafting: Enabling whole brain parcellation in the presence of large lesions
    NeuroImage
    A. M. Radwan, L. Emsell, J. Blommaert, A. Zhylka, S. Kovacs, T. Theys, N. Sollmann, P. Dupont, S. Sunaert, 2021, 229
    doi paper (open access)
    Abstract
  2. Tracking the Corticospinal Tract in Patients With High-Grade Glioma: Clinical Evaluation of Multi-Level Fiber Tracking and Comparison to Conventional Deterministic Approaches
    Frontiers in Oncology
    A. Zhylka, N. Sollmann, F. Kofler, A. Radwan, A. De Luca, J. Gempt, B. Wiestler, B. Menze, S. M. Krieg, C. Zimmer, J. S. Kirschke, S. Sunaert, A. Leemans, J. P. W. Pluim, 2021, 11
    doi paper (open access)
    Abstract
  3. cldice - a novel topology-preserving loss function for tubular structure segmentation
    Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR)
    S. Shit, J. C. Paetzold, A. Sekuboyina, I. Ezhov, A. Unger, A. Zhylka, J. P. W. Pluim, U. Bauer, B. H. Menze, 2021
    url
    Abstract
  4. Reproducibility report: Towards visually explaining variational autoencoders
    ML Reproducibility Challenge 2020
    F. Brongers, B. Leijnse, L. Eshuijs, V. van Veldhuizen, 2021
    url
    Abstract
  5. Creating small but meaningful representations of digital pathology images
    Proceedings of the MICCAI Workshop on Computational Pathology
    C. Guérendel, P. Arnold, B. Torben-Nielsen, 2021
    url
    Abstract

2020

  1. Black holes in string theory with duality twists
    Journal of High Energy Physics
    C. Hull, E. Marcus, K. Stemerdink, S. Vandoren, 2020, 2020;(7)
    doi paper (open access)
    Abstract
  2. Deep Learning-based Initialization of Iterative Reconstruction for Breast Tomosynthesis
    6th International Conference on Image Formation in X-Ray Computed Tomography (CT-meeting)
    K. Michielsen, N. Moriakov, J. Teuwen, I. Sechopoulos, 2020
    ArXiv
    Abstract
  3. Convolutional neural networks
    Handbook of Medical Image Computing and Computer Assisted Intervention
    J. Teuwen, N. Moriakov, 2020
    doi
    Abstract
  4. Machine learning-based classification of viewing behavior using a wide range of statistical oculomotor features
    Journal of Vision
    T. Kootstra, J. Teuwen, J. Goudsmit, T. Nijboer, M. Dodd, S. Van Der Stigchel, 2020, 20;(9):1
    doi paper (open access)
    Abstract
  5. Tussen data en theorie
    Tijdschrift voor Toezicht
    J. Goudsmit, J. Teuwen, 2020, 11;(1):48-53
    doi
    Abstract
  6. Kernel of cyclegan as a principal homogeneous space
    International Conference on Learning Representations
    N. Moriakov, J. Adler, J. Teuwen, 2020
    url preprints
    Abstract
  7. A Deep Learning-based correction to EPID dosimetry for attenuation and scatter in the Unity MR-Linac system.
    Physica Medica
    I. Olaciregui-Ruiz, I. Torres-Xirau, J. Teuwen, U. A. van der Heide, A. Mans, 2020, 71
    PubMed
    Abstract
  8. Computable Følner monotilings and a theorem of Brudno
    Ergodic Theory and Dynamical Systems
    N. Moriakov, 2020, 41;(11):3389-3416
    doi
    Abstract
  9. Cross-scanner and cross-protocol multi-shell diffusion MRI data harmonization: Algorithms and results
    NeuroImage
    L. Ning, E. Bonet-Carne, F. Grussu, F. Sepehrband, E. Kaden, J. Veraart, S. B. Blumberg, C. S. Khoo, M. Palombo, I. Kokkinos, D. C. Alexander, J. Coll-Font, B. Scherrer, S. K. Warfield, S. C. Karayumak, Y. Rathi, S. Koppers, L. Weninger, J. Ebert, D. Merhof, D. Moyer, M. Pietsch, D. Christiaens, R. A. Gomes Teixeira, J. Tournier, K. G. Schilling, Y. Huo, V. Nath, C. Hansen, J. Blaber, B. A. Landman, A. Zhylka, J. P. Pluim, G. Parker, U. Rudrapatna, J. Evans, C. Charron, D. K. Jones, C. M. Tax, 2020, 221
    doi paper (open access)
    Abstract

2019

  1. A new class of SYK-like models with maximal chaos
    Journal of High Energy Physics
    E. Marcus, S. Vandoren, 2019, 2019;(1)
    doi paper (open access)
    Abstract
  2. i-RIM applied to the fastMRI challenge
    P. Putzky, D. Karkalousos, J. Teuwen, N. Moriakov, B. Bakker, M. Caan, M. Welling, 2019
    ArXiv
    Abstract
  3. Learned SIRT for Cone Beam Computed Tomography Reconstruction
    R. J. Dilz, L. Schröder, N. Moriakov, J. Sonke, J. Teuwen, 2019
    ArXiv
    Abstract
  4. Artificial Intelligence–Based Classification of Breast Lesions Imaged With a Multiparametric Breast MRI Protocol With Ultrafast DCE-MRI, T2, and DWI
    Investigative Radiology
    M. U. Dalmiş, A. Gubern-Mérida, S. Vreemann, P. Bult, N. Karssemeijer, R. Mann, J. Teuwen, 2019, 54;(6):325-332
    doi
    Abstract
  5. State-of-the-Art Deep Learning in Cardiovascular Image Analysis
    JACC: Cardiovascular Imaging
    G. Litjens, F. Ciompi, J. M. Wolterink, B. D. De Vos, T. Leiner, J. Teuwen, I. Išgum, 2019, 12;(8):1549-1565
    doi paper (open access)
    Abstract
  6. Can we reduce the workload of mammographic screening by automatic identification of normal exams with artificial intelligence? A feasibility study
    European Radiology
    A. Rodriguez-Ruiz, K. Lång, A. Gubern-Merida, J. Teuwen, M. Broeders, G. Gennaro, P. Clauser, T. H. Helbich, M. Chevalier, T. Mertelmeier, M. G. Wallis, I. Andersson, S. Zackrisson, I. Sechopoulos, R. M. Mann, 2019, 29;(9):4825-4832
    doi paper (open access)
    Abstract
  7. MemCNN: A Python/PyTorch package for creating memory-efficient invertible neural networks
    Journal of Open Source Software
    S. C. Van De Leemput, J. Teuwen, B. Van Ginneken, R. Manniesing, 2019, 4;(39):1576
    doi paper (open access)
    Abstract
  8. Breast parenchyma analysis and classification for breast masses detection using texture feature descriptors and neural networks in dedicated breast CT images
    Medical Imaging 2019: Computer-Aided Diagnosis
    M. Caballo, J. Teuwen, R. Mann, I. Sechopoulos, 2019
    doi
    Abstract
  9. Differentiating benign and malignant mass and non-mass lesions in breast DCE-MRI using normalized frequency-based features
    International Journal of Computer Assisted Radiology and Surgery
    F. Ayatollahi, S. B. Shokouhi, J. Teuwen, 2019, 15;(2):297-307
    doi
    Abstract
  10. Vendor-independent soft tissue lesion detection using weakly supervised and unsupervised adversarial domain adaptation
    Medical Imaging 2019: Computer-Aided Diagnosis
    J. Teuwen, N. Moriakov, R. Mann, E. Marchiori, J. Van Vugt, A. Gubern-Mérida, 2019
    doi preprints paper (open access)
    Abstract
  11. Deep learning framework for digital breast tomosynthesis reconstruction
    Medical Imaging 2019: Physics of Medical Imaging
    N. Moriakov, K. Michielsen, J. Adler, R. Mann, I. Sechopoulos, J. Teuwen, 2019
    doi preprints
    Abstract

2018

  1. Charge-dependent flow induced by magnetic and electric fields in heavy ion collisions
    Physical Review C
    U. Gürsoy, D. Kharzeev, E. Marcus, K. Rajagopal, C. Shen, 2018, 98;(5)
    doi paper (open access)
    Abstract
  2. On Maximum Focused Electric Energy in Bounded Regions
    J. Teuwen, P. Urbach, 2018
    ArXiv
    Abstract
  3. Pectoral muscle segmentation in breast tomosynthesis with deep learning
    Medical Imaging 2018: Computer-Aided Diagnosis
    A. Rodriguez-Ruiz, J. Teuwen, K. Chung, N. Karssemeijer, M. Chevalier, A. Gubern-Mérida, I. Sechopoulos, 2018
    doi
    Abstract
  4. Automated lesion detection and segmentation in digital mammography using a u-net deep learning network
    14th International Workshop on Breast Imaging (IWBI 2018)
    T. De Moor, A. Rodriguez-Ruiz, R. Mann, A. Gubern Mérida, J. Teuwen, 2018
    doi preprints
    Abstract
  5. Student beats the teacher: deep neural networks for lateral ventricles segmentation in brain MR
    Medical Imaging 2018: Image Processing
    J. Teuwen, M. Ghafoorian, R. Manniesing, F. De Leeuw, N. Karssemeijer, B. Van Ginneken, B. Platel, 2018
    doi preprints
    Abstract
  6. Improving Breast Cancer Detection Using Symmetry Information with Deep Learning
    Image Analysis for Moving Organ, Breast, and Thoracic Images
    Y. Brhane Hagos, A. Gubern Mérida, J. Teuwen, 2018
    doi preprints
    Abstract
  7. Fluctuations of ergodic averages for actions of groups of polynomial growth
    Studia Mathematica
    N. Moriakov, 2018, 240;(3):255-273
    doi
    Abstract
  8. On systems with quasi-discrete spectrum
    Studia Mathematica
    M. Haase, N. Moriakov, 2018, 241;(2):173-199
    doi
    Abstract

2017

  1. $L^p-L^q$- off-diagonal estimates for the Ornstein-Uhlenbeck semigroup: Some positive and negative results
    Bulletin of the Australian Mathematical Society
    A. Amenta, J. Teuwen, 2017, 96;(1):154-161
    doi preprints
    Abstract
  2. New reconstruction algorithm for digital breast tomosynthesis: better image quality for humans and computers
    Acta Radiologica
    A. Rodriguez-Ruiz, J. Teuwen, S. Vreemann, R. W. Bouwman, R. E. Van Engen, N. Karssemeijer, R. M. Mann, A. Gubern-Merida, I. Sechopoulos, 2017, 59;(9):1051-1059
    doi paper (open access)
    Abstract
  3. On the semi-classical limit of scalar products of the XXZ spin chain
    Journal of High Energy Physics
    Y. Jiang, J. Brunekreef, 2017, 2017;(3)
    doi paper (open access)
    Abstract
  4. On Effective Birkhoff’s Ergodic Theorem for Computable Actions of Amenable Groups
    Theory of Computing Systems
    N. Moriakov, 2017, 62;(5):1269-1287
    doi paper (open access)
    Abstract
  5. Endothelial progenitor cells and plaque burden in stented coronary artery segments: an optical coherence tomography study six months after elective PCI
    BMC Cardiovascular Disorders
    S. Otto, K. Nitsche, C. Jung, A. Kryvanos, A. Zhylka, K. Heitkamp, J. Gutiérrez-Chico, B. Goebel, P. C. Schulze, H. R. Figulla, T. C. Poerner, 2017, 17;(1)
    doi paper (open access)
    Abstract

2016

  1. Magnetohydrodynamics and charged flow in heavy ion collisions
    Nuclear Physics A
    U. Gürsoy, D. Kharzeev, E. Marcus, K. Rajagopal, 2016, 956
    doi
    Abstract
  2. On the integral kernels of derivatives of the Ornstein–Uhlenbeck semigroup
    Infinite Dimensional Analysis, Quantum Probability and Related Topics
    J. Teuwen, 2016, 19;(04):1650030
    doi preprints
    Abstract
  3. Shedding new light on Gaussian harmonic analysis
    J. Teuwen, 2016
    doi
    Abstract
  4. A Landscape of Pharmacogenomic Interactions in Cancer
    Cell
    F. Iorio, T. A. Knijnenburg, D. J. Vis, G. R. Bignell, M. P. Menden, M. Schubert, N. Aben, E. Gonçalves, S. Barthorpe, H. Lightfoot, T. Cokelaer, P. Greninger, E. Van Dyk, H. Chang, H. De Silva, H. Heyn, X. Deng, R. K. Egan, Q. Liu, T. Mironenko, X. Mitropoulos, L. Richardson, J. Wang, T. Zhang, S. Moran, S. Sayols, M. Soleimani, D. Tamborero, N. Lopez-Bigas, P. Ross-Macdonald, M. Esteller, N. S. Gray, D. A. Haber, M. R. Stratton, C. H. Benes, L. F. Wessels, J. Saez-Rodriguez, U. Mcdermott, M. J. Garnett, 2016, 166;(3):740-754
    doi paper (open access)
    Abstract

2015

  1. A note on Gaussian maximal functions
    Indagationes Mathematicae
    J. Teuwen, 2015, 26;(1):106-112
    doi preprints paper (open access)
    Abstract

2010

  1. Combining regression and classification methods for improving automatic speaker age recognition
    2010 IEEE International Conference on Acoustics, Speech and Signal Processing
    C. Van Heerden, E. Barnard, M. Davel, C. Van Der Walt, E. Van Dyk, M. Feld, C. Muller, 2010
    doi
    Abstract